BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014C01SP1|AL426652
(764 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig943 1501 0.0
3x_Contig1682 446 e-125
>3x_Contig943
Length = 2708
Score = 1501 bits (757), Expect = 0.0
Identities = 764/765 (99%), Gaps = 1/765 (0%)
Strand = Plus / Plus
Query: 1 gatctatcaatccagatgaggccgttgcctacggtgctgctgtccaagctgctattttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1224 gatctatcaatccagatgaggccgttgcctacggtgctgctgtccaagctgctattttga 1283
Query: 61 caggtgatcaatcttcaaagactcaagatttgttgctattggatgttactccattgtctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1284 caggtgatcaatcttcaaagactcaagatttgttgctattggatgttactccattgtctt 1343
Query: 121 tgggtattgaaaccgccggtggtatcatgacgaagt-gattccaagaaactctaccattc 179
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1344 tgggtattgaaaccgccggtggtatcatgacgaagttgattccaagaaactctaccattc 1403
Query: 180 caaccaagaagtctgaaatcttctccacttatgctgataaccaacctggtgtgttgattc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1404 caaccaagaagtctgaaatcttctccacttatgctgataaccaacctggtgtgttgattc 1463
Query: 240 aagtgtttgaaggtgaaagaacaaagacaaaggataacaacttattgggtaagtttgagt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1464 aagtgtttgaaggtgaaagaacaaagacaaaggataacaacttattgggtaagtttgagt 1523
Query: 300 tgtctggtatcccaccagcaccaagaggtgtcccacaaatcgaagtcacctttgatatcg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1524 tgtctggtatcccaccagcaccaagaggtgtcccacaaatcgaagtcacctttgatatcg 1583
Query: 360 atgctaacggtatcttgaacgtttccgctctagagaagggtaccggtaagaccagcaaga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1584 atgctaacggtatcttgaacgtttccgctctagagaagggtaccggtaagaccagcaaga 1643
Query: 420 ttactatcactaacgataagggtagattatccaaggaagatattgaaagaatggtgtcag 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1644 ttactatcactaacgataagggtagattatccaaggaagatattgaaagaatggtgtcag 1703
Query: 480 aagccgagaagttcaaggtcgaagatgaagccgaagctgaacgtgtccaaacaagaaact 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1704 aagccgagaagttcaaggtcgaagatgaagccgaagctgaacgtgtccaaacaagaaact 1763
Query: 540 ctttggaagcttatgctttcagcttgaagaacactgtcggcgaatctggattcaaggaga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1764 ctttggaagcttatgctttcagcttgaagaacactgtcggcgaatctggattcaaggaga 1823
Query: 600 aggttgatgctgatgacgtctccaaactacaaactgctgtggaagaaactatcagctggt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1824 aggttgatgctgatgacgtctccaaactacaaactgctgtggaagaaactatcagctggt 1883
Query: 660 tagatggatctcaagcagcttccacagatgaatacaaggaaagacaaaaagaattggagg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1884 tagatggatctcaagcagcttccacagatgaatacaaggaaagacaaaaagaattggagg 1943
Query: 720 atgttgctaacccaatcatgaccaagttctacagcgctggcggta 764
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1944 atgttgctaacccaatcatgaccaagttctacagcgctggcggta 1988
>3x_Contig1682
Length = 16889
Score = 446 bits (225), Expect = e-125
Identities = 439/509 (86%), Gaps = 1/509 (0%)
Strand = Plus / Plus
Query: 1 gatctatcaatccagatgaggccgttgcctacggtgctgctgtccaagctgctattttga 60
|||| ||||| |||||||| || || || ||||||||||| || ||||||||| ||||||
Sbjct: 1550 gatccatcaacccagatgaagctgtcgcttacggtgctgccgttcaagctgctgttttga 1609
Query: 61 caggtgatcaatcttcaaagactcaagatttgttgctattggatgttactccattgtctt 120
||||||| |||||||| |||||||||||||||||| | ||||||||| |||||||||| |
Sbjct: 1610 caggtgaccaatcttctaagactcaagatttgttgttgttggatgttgctccattgtcct 1669
Query: 121 tgggtattgaaaccgccggtggtatcatgacgaagt-gattccaagaaactctaccattc 179
||||||||||||| || |||||| ||||||| |||| |||||| ||||||||||||||||
Sbjct: 1670 tgggtattgaaactgctggtggtgtcatgaccaagttgattcctagaaactctaccattc 1729
Query: 180 caaccaagaagtctgaaatcttctccacttatgctgataaccaacctggtgtgttgattc 239
|||| ||||||||||||||||||||||| || |||||||||||||| ||||| ||||| |
Sbjct: 1730 caactaagaagtctgaaatcttctccacatacgctgataaccaaccaggtgtcttgatcc 1789
Query: 240 aagtgtttgaaggtgaaagaacaaagacaaaggataacaacttattgggtaagtttgagt 299
|||| | |||||||||||| | | |||||||| |||||||| || |||||||| || |
Sbjct: 1790 aagtttacgaaggtgaaagagctagaacaaaggacaacaacttgttaggtaagttcgact 1849
Query: 300 tgtctggtatcccaccagcaccaagaggtgtcccacaaatcgaagtcacctttgatatcg 359
|| |||||||||||||||| |||||||||||||||||||||||||| || || ||| |||
Sbjct: 1850 tgactggtatcccaccagctccaagaggtgtcccacaaatcgaagttactttcgatgtcg 1909
Query: 360 atgctaacggtatcttgaacgtttccgctctagagaagggtaccggtaagaccagcaaga 419
||||||||||||||||||||||||| || | || |||||||| ||||| | ||||
Sbjct: 1910 atgctaacggtatcttgaacgtttctgccgttgaaaagggtactggtaaatctgaaaaga 1969
Query: 420 ttactatcactaacgataagggtagattatccaaggaagatattgaaagaatggtgtcag 479
|||| ||||||||||| ||||||||||| || ||||||||||| ||||||||||| || |
Sbjct: 1970 ttaccatcactaacgacaagggtagattgtctaaggaagatatcgaaagaatggtttctg 2029
Query: 480 aagccgagaagttcaaggtcgaagatgaa 508
|||| || || | ||||| |||||||||
Sbjct: 2030 aagctgaaaaatacaaggaagaagatgaa 2058
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6233
Number of Sequences: 1807
Number of extensions: 6233
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 2
length of query: 764
length of database: 10,358,551
effective HSP length: 16
effective length of query: 748
effective length of database: 10,329,639
effective search space: 7726569972
effective search space used: 7726569972
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)